Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899919.1_cds_XP_016449952.1_44450
CDS Infomation

[gene=LOC107774817] [db_xref=GeneID:107774817] [protein=cyprosin-like] [protein_id=XP_016449952.1] [location=join(21780..22124,22542..22602,22704..22798,22873..22985,23183..23351,23453..23492,24643..24707,24787..24900,25397..25627,26305..26421,27335..27420,27502..27586)] [gbkey=CDS]
Sequence

ATGGGGATCAAACTTTTACTTGCAGCAATATTAATATGGGATTTCATAACCTGTGCTTTT
GGCTTCAATGTATCTGCTGATAATATGATAAGGATTGGATTAAAGCGACGACCGTTGGAT
CTTTATAGCGTAAAGGGTGCAAGAATCTACGCTAAAGATCATCATAAAAGAGGTTCAAAT
AGGAACTTTGATGCACTCAAGGATGAAATAGTTTATCTGAAAAACTATATGGACGTTCAG
TATTTCGCAGAGATTGGTATAGGTTCACCTCCTCAGAAATTTGCTGTTGTGTTTGATACT
GGCAGTTCCAATCTTTGGATCCCGTCTTCGAAATGCATCTTCTCTATTGCATGTTATCTT
CGTTCCAGATACAGATCAAGACTATCCACTACATACACAAAAATTGGAAAATCTTGCAAA
ATCCCTTTTGGAACAAGATCAGTGCGCGGATTCTTCAGCCAAGACAATACTAAAGTTGGA
AATGCTGTTATAAAGCAGCAGGTTTTTACTGAGGTAACACACGAAAGATTTTTCACATTC
TTGCGTGCACGATATGATGGAGTACTAGGACTAGGATTTCAAGATGTTGCTGCAGGACGA
GTAACGCCAGTATGGTATAATATGTTGCTTCAGCGTATCGTTACAAAGCCAATCTTCTCA
TTCTGGTTAAATCGAGATCCTAAATCTAGTTTCGGGGGTGAAATTCTATTTGGAGGCGTC
GATTTGACTCACTTCAGGGGTCAACATACCTATGTTCCCGTCGCTCAAAATGGTTACTGG
GAGATTGAAATAGGCGATCTCTTTATTGGTAACAATTCAACAGGTCTTTGCAGAGGTGGT
TGTCCGGCTATTGTGGATACTGGAACGTCTTTTCTTGCTGGTCCGACTACTATTTTAACT
CAAATAAATCATGCTATTGGAGCAGAAGGAATTGTTAGTATGGAATGTAAAACTGTTTTC
TCAAATTATGGGAATTTGATTTGGGAAAACTTAATATCAGGGTTACAACCTGAAAGAATT
TGCCACAGAATTCGCCTCTGTAAACATAACGTCTCGTTCGACGAAAATGTACACAGCTAC
GAGAAGAAAATGGTGGTTAGAAATTCAAAATTGGAGAAATTATCAAATGATGAAAGTGCT
TTATGTTCTTTCTGTGAAATGACAGTTTTCTGGATGCAAGTAGAGGTTAGAAAAGAGAGA
ACAAAAGAAAAAGCATTTGAATATGTTAATCAGCTGTGTGAGAAGCTACCAGATCCGAGA
GGAAAATCATTTATCAACTGTGATGTCTTTTCCCTGCCACATATTACAATTACCATTGGG
AATAAATCTTTCCCCCTTTCTCCGGATCAATATGTTATCAGAATCGAAAACAATCACGGT
GCTCACTGTGTTAGTGGATTTACAGCGTTGGATGTGCATCCACGACGTCCCCTCTGGGTT
CTTGGAGATGTATTTTTGAGAGCATATCACACTGTTTTTGACTTTGGTAATCTACAAGTT
GGATTCGCGGAAAGTGCTTAG

Peptide Sequence

PEP ID

XP_016449952.1
PEP Infomation

PREDICTED: cyprosin-like [Nicotiana tabacum]
Sequence

MGIKLLLAAILIWDFITCAFGFNVSADNMIRIGLKRRPLDLYSVKGARIYAKDHHKRGSN
RNFDALKDEIVYLKNYMDVQYFAEIGIGSPPQKFAVVFDTGSSNLWIPSSKCIFSIACYL
RSRYRSRLSTTYTKIGKSCKIPFGTRSVRGFFSQDNTKVGNAVIKQQVFTEVTHERFFTF
LRARYDGVLGLGFQDVAAGRVTPVWYNMLLQRIVTKPIFSFWLNRDPKSSFGGEILFGGV
DLTHFRGQHTYVPVAQNGYWEIEIGDLFIGNNSTGLCRGGCPAIVDTGTSFLAGPTTILT
QINHAIGAEGIVSMECKTVFSNYGNLIWENLISGLQPERICHRIRLCKHNVSFDENVHSY
EKKMVVRNSKLEKLSNDESALCSFCEMTVFWMQVEVRKERTKEKAFEYVNQLCEKLPDPR
GKSFINCDVFSLPHITITIGNKSFPLSPDQYVIRIENNHGAHCVSGFTALDVHPRRPLWV
LGDVFLRAYHTVFDFGNLQVGFAESA

Transcript Sequence

Gene sequence data has not been registered.